This package contains colormaps for commonly-used oceanographic variables. Most of the colormaps started from matplotlib colormaps, but have now been adjusted using the viscm tool to be perceptually uniform.

This package provides a stable interface for interactions between Snakemake and its storage plugins.

This package provides utilities and tools for open data science including tools for accessing data sets in Python.

pykdtree is a kd-tree implementation for fast nearest neighbour search in Python.

Baycomp is a library for Bayesian comparison of classifiers. Functions in the library compare two classifiers on one or on multiple data sets. They compute three probabilities: the probability that the first classifier has higher scores than the second, the probability that differences are within the region of practical equivalence (rope), or that the second classifier has higher scores.

Particle provides a pythonic interface to the Particle Data Group (PDG) particle data tables and particle identification codes, with extended particle information and extra goodies.

Clarabel.rs is a Rust implementation of an interior point numerical solver for convex optimization problems using a novel homogeneous embedding.

Plotnine is a Python implementation of the Grammar of Graphics. It is a powerful graphics concept for creating plots and visualizations in a structured and declarative manner. It is inspired by the R package ggplot2 and aims to provide a similar API and functionality in Python.

flox mainly provides strategies for fast GroupBy reductions with dask.array. It uses the MapReduce paradigm (or a "tree reduction") to run the GroupBy operation in a parallel-native way totally avoiding a sort or shuffle operation. flox can use either dask or cubed as its backend.

Hist is an analyst-friendly front-end for boost-histogram.

This package provides a Python library for working with NeuroML descriptions of neuronal models

skbase provides base classes for creating scikit-learn-like parametric objects, along with tools to make it easier to build your own packages that follow these design patterns.

This package provides a logging plugin for Snakemake that utilizes python-rich for enhanced terminal styling and progress bars.

This package implements schema validation for Xarray objects.

This package provides tools to easily search and download French data from INSEE and IGN APIs. This data includes more than 150 000 macroeconomic series, a dozen datasets of local french data, numerous sources available on insee.fr, geographical limits of administrative areas taken from IGN as well as key metadata and SIRENE database containing data on all French compagnies.

Marsilea is a Python library for creating composable visualizations in a declarative way. It is built on top of Matplotlib and provides a high-level API for you to puzzle different visualizations together like logo.

This package implements a functionality to create and manipulate plot legends for matplotlib.

This package provides a stable interface for interactions between Snakemake and its logger plugins.

This package implements sparse arrays of arbitrary dimension on top of numpy and scipy.sparse. Sparse array is a matrix in which most of the elements are zero. python-sparse generalizes the scipy.sparse.coo_matrix and scipy.sparse.dok_matrix layouts, but extends beyond just rows and columns to an arbitrary number of dimensions. Additionally, this project maintains compatibility with the numpy.ndarray interface rather than the numpy.matrix interface used in scipy.sparse. These differences make this project useful in certain situations where scipy.sparse matrices are not well suited, but it should not be considered a full replacement. It lacks layouts that are not easily generalized like compressed sparse row/column(CSR/CSC) and depends on scipy.sparse for some computations.

This package provides a Pytest plugin that facilitates the comparison of images produced by PyVista, generating cached images from tests and comparing subsequent results against that cache.

This package provides optimized tools for group-indexing operations: aggregated sum and more.

Polars is a DataFrame library for manipulating structured data.

spin is a simple interface for common development tasks. It comes with a few common build commands out the box, but can easily be customized per project.

The impetus behind developing the tool was the mass migration of scientific Python libraries (SciPy, scikit-image, and NumPy, etc.) to Meson, after distutils was deprecated. When many of the build and installation commands changed, it made sense to abstract away the nuisance of having to re-learn them.

This package provides a Python package for calculating tissue-specificity metrics for gene expression.