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Handsontable is a data grid component with an Excel like appearance. Built in JavaScript, it integrates with any data source with peak efficiency. It comes with powerful features like data validation, sorting, grouping, data binding, formula support or column ordering.
This package provides functions that:
find the minimum/maximum of a linear or quadratic function,
sample an underdetermined or overdetermined system,
solve a linear system Ax=B for the unknown x.
It includes banded and tridiagonal linear systems. The package calls Fortran functions from LINPACK.
This package computes fast (relative to other implementations) approximate Shapley values for any supervised learning model. Shapley values help to explain the predictions from any black box model using ideas from game theory; see doi.org/10.1007/s10115-013-0679-x for details.
This package provides tools for the estimation and simulation of latent variable models.
This package provides functionality to assert conditions that have to be met so that errors in data used in analysis pipelines can fail quickly. It is similar to stopifnot() but more powerful, friendly, and easier for use in pipelines.
This package provides routines to find the root of nonlinear functions, and to perform steady-state and equilibrium analysis of ordinary differential equations (ODE). It includes routines that:
generate gradient and jacobian matrices (full and banded),
find roots of non-linear equations by the Newton-Raphson method,
estimate steady-state conditions of a system of (differential) equations in full, banded or sparse form, using the Newton-Raphson method, or by dynamically running,
solve the steady-state conditions for uni- and multicomponent 1-D, 2-D, and 3-D partial differential equations, that have been converted to ordinary differential equations by numerical differencing (using the method-of-lines approach).
This package provides a dependency management toolkit for R. Using renv, you can create and manage project-local R libraries, save the state of these libraries to a lockfile, and later restore your library as required. Together, these tools can help make your projects more isolated, portable, and reproducible.
This package generates area-proportional Euler diagrams using numerical optimization. An Euler diagram is a generalization of a Venn diagram, relaxing the criterion that all interactions need to be represented. Diagrams may be fit with ellipses and circles via a wide range of inputs and can be visualized in numerous ways.
Provide nonparametric methods for mean regression model, modal regression and conditional density estimation in the presence/absence of measurement error. Bandwidth selection is also provided for each method.
The r-abd package contains data sets and sample code for the Analysis of biological data by Michael Whitlock and Dolph Schluter.
This package lets you create extra Analysis Results Data (ARD) summary objects. The package supplements the simple ARD functions from the cards package, exporting functions to put statistical results in the ARD format. These objects are used and re-used to construct summary tables, visualizations, and written reports.
RestRserve is an R web API framework for building high-performance AND robust microservices and app backends. With Rserve backend on UNIX-like systems it is parallel by design. It will handle incoming requests in parallel - each request in a separate fork.
This package provides tools to conditionally rotate or back-up files based on their size or the date of the last backup; inspired by the utility logrotate'.
This package provides functions for reading ontologies into R as lists and manipulating sets of ontological terms.
Implementation of the web-based Practical Meta-Analysis Effect Size Calculator from David B. Wilson in R. Based on the input, the effect size can be returned as standardized mean difference, Cohen's f, Hedges' g, Pearson's r or Fisher's transformation z, odds ratio or log odds, or eta squared effect size.
This package provides a base S4 class for comparative methods, incorporating one or more trees and trait data.
This package provides functions for animations in statistics, covering topics in probability theory, mathematical statistics, multivariate statistics, non-parametric statistics, sampling survey, linear models, time series, computational statistics, data mining and machine learning. These functions may be helpful in teaching statistics and data analysis. Also provided in this package are a series of functions to save animations to various formats, e.g. GIF, HTML pages, PDF, and videos. PDF animations can be inserted into Sweave / knitr easily.
This package estimates optimal cutpoints for binary classification metrics. It also validates performance using bootstrapping. Some methods for more robust cutpoint estimation are supported, e.g. a parametric method assuming normal distributions, bootstrapped cutpoints, and smoothing of the metric values per cutpoint using Generalized Additive Models. Various plotting functions are included.
This package provides a set of tools to perform Quantitative Trait Locus (QTL) analysis in experimental crosses. It is a reimplementation of the R/qtl package to better handle high-dimensional data and complex cross designs. Broman et al. (2018) <doi:10.1534/genetics.118.301595>.
mlr3misc provides frequently used helper functions and assertions used in mlr3 and its companion packages. It comes with helper functions for functional programming, for printing, to work with data.table, as well as some generally useful R6 classes. This package also supersedes the package BBmisc.
When analyzing data, plots are a helpful tool for visualizing data and interpreting statistical models. This package provides a set of simple tools for building plots incrementally, starting with an empty plot region, and adding bars, data points, regression lines, error bars, gradient legends, density distributions in the margins, and even pictures. The package builds further on R graphics by simply combining functions and settings in order to reduce the amount of code to produce for the user. As a result, the package does not use formula input or special syntax, but can be used in combination with default R plot functions.
This package creates dummy columns from columns that have categorical variables (character or factor types). You can also specify which columns to make dummies out of, or which columns to ignore. Also creates dummy rows from character, factor, and Date columns. This package provides a significant speed increase from creating dummy variables through model.matrix().
This package provides a simple client package for the Amazon Web Services (AWS) Simple Storage Service (S3) REST API.
This is a collection of tools for assessment of feature importance and feature effects. Key functions are:
feature_importance()for assessment of global level feature importance,ceteris_paribus()for calculation of the what-if plots,partial_dependence()for partial dependence plots,conditional_dependence()for conditional dependence plots,accumulated_dependence()for accumulated local effects plots,aggregate_profiles()andcluster_profiles()for aggregation of ceteris paribus profiles,generic
print()andplot()for better usability of selected explainers,generic
plotD3()for interactive, D3 based explanations, andgeneric
describe()for explanations in natural language.