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This package provides five omnibus tests for testing the composite hypothesis of normality.
This package provides a Wrapper around the SVDLIBC library for (truncated) singular value decomposition of a sparse matrix. Currently, only sparse real matrices in Matrix package format are supported.
This package provides functions, data sets, analyses and examples from the third edition of the book A Handbook of Statistical Analyses Using R (Torsten Hothorn and Brian S. Everitt, Chapman & Hall/CRC, 2014). The first chapter of the book, which is entitled An Introduction to R, is completely included in this package, for all other chapters, a vignette containing all data analyses is available. In addition, Sweave source code for slides of selected chapters is included in this package.
Flexibly restructure and aggregate data using just two functions: melt and cast. This package provides them.
Armadillo is a templated C++ linear algebra library that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. This package includes the header files from the templated Armadillo library.
This package analyzes data with robust methods such as regression methodology including model selections and multivariate statistics.
This package provides a new class Formula, which extends the base class formula. It supports extended formulas with multiple parts of regressors on the right-hand side and/or multiple responses on the left-hand side.
This package provides pure C++ implementations for reading and writing several common data formats based on Google protocol-buffers. It currently supports rexp.proto for serialized R objects, geobuf.proto for binary geojson, and mvt.proto for vector tiles. This package uses the auto-generated C++ code by protobuf-compiler, hence the entire serialization is optimized at compile time. The RProtoBuf package on the other hand uses the protobuf runtime library to provide a general-purpose toolkit for reading and writing arbitrary protocol-buffer data in R.
This package provides data used as examples to demonstrate GAMLSS models.
Several tools for assessing the quality of fit of a gaussian nonlinear model are provided.
This package enables you to estimate the p-values for predictors x against target variable y in Lasso regression, using the regularization strength when each predictor enters the active set of regularization path for the first time as the statistic.
This is a dedicated package to WELL pseudo random generators, which were introduced in Panneton et al. (2006), ``Improved Long-Period Generators Based on Linear Recurrences Modulo 2'', ACM Transactions on Mathematical Software.
This package contains the function ggsurvplot() for easily drawing beautiful and 'ready-to-publish' survival curves with the 'number at risk' table and 'censoring count plot'. Other functions are also available to plot adjusted curves for Cox model and to visually examine Cox model assumptions.
This package provides functions for performing common tasks when working with slippy map tile service APIs e.g. Google maps, Open Street Map, Mapbox, Stamen, among others. Functionality includes converting from latitude and longitude to tile numbers, determining tile bounding boxes, and compositing tiles to a georeferenced raster image.
This package abbreviates strings to a specified minimum number of characters, such that the strings remain unique (if they originally were).
This package provides a set of restricted permutation designs for freely exchangeable, line transects (time series), spatial grid designs and permutation of blocks (groups of samples). permute also allows split-plot designs, in which the whole-plots or split-plots or both can be freely exchangeable.
This package implements synchronization between R processes (spawned by using the parallel package for instance) using file locks. It supports both exclusive and shared locking.
This package provides programs for Martinussen and Scheike (2006), `Dynamic Regression Models for Survival Data', Springer Verlag. Plus more recent developments. Additive survival model, semiparametric proportional odds model, fast cumulative residuals, excess risk models and more. Flexible competing risks regression including GOF-tests. Two-stage frailty modelling. PLS for the additive risk model.
This package provides functions for Meta-analysis Burden Test, Sequence Kernel Association Test (SKAT) and Optimal SKAT (SKAT-O) by Lee et al. (2013) <doi:10.1016/j.ajhg.2013.05.010>. These methods use summary-level score statistics to carry out gene-based meta-analysis for rare variants.
Servr provides an HTTP server in R to serve static files, or dynamic documents that can be converted to HTML files (e.g., R Markdown) under a given directory.
This package enhances the R Optimization Infrastructure (ROI) package with the alabama solver for solving nonlinear optimization problems.
This package computes exact conditional p-values and quantiles using an implementation of the Shift-Algorithm by Streitberg & Roehmel.
This package provides functions related to human natural ordering. It handles adjacent digits in a character sequence as a number so that natural sort function arranges a character vector by their numbers, not digit characters.
This package lets you fit pedigree-based mixed-effects models.